Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.77■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MIR6724-1-201ENST00000616420 92 ntBASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MIR6724-2-201ENST00000616483 92 ntBASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MIR6724-4-201ENST00000617390 92 ntBASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MIR6724-3-201ENST00000622482 92 ntBASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 KRT16P3-201ENST00000439127 1283 ntBASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AC233723.2-201ENST00000623798 2106 ntBASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 LINC01529-204ENST00000636474 1715 ntBASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.72■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 C17orf82-201ENST00000623772 1530 ntBASIC19.71■□□□□ 0.75
IGKV1D-43A0A0B4J1Z2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 FP325331.1-202ENST00000623531 1380 ntBASIC19.69■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IGKV1D-43A0A0B4J1Z2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms