Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC187A0A096LP49 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.3■■□□□ 1
CCDC187A0A096LP49 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC187A0A096LP49 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 AP005435.1-201ENST00000529293 1178 ntBASIC21.29■■□□□ 1
CCDC187A0A096LP49 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC187A0A096LP49 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
CCDC187A0A096LP49 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.28■■□□□ 1
CCDC187A0A096LP49 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.28■■□□□ 1
CCDC187A0A096LP49 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CCDC187A0A096LP49 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC187A0A096LP49 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC187A0A096LP49 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC187A0A096LP49 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC187A0A096LP49 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.27■■□□□ 1
CCDC187A0A096LP49 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.27■■□□□ 1
CCDC187A0A096LP49 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 ID1-201ENST00000376105 1233 ntBASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC187A0A096LP49 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 AP003733.4-201ENST00000623785 1697 ntBASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 AC105233.4-201ENST00000642045 216 ntBASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC187A0A096LP49 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC187A0A096LP49 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC187A0A096LP49 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC187A0A096LP49 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms