Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC106827.1-201ENST00000366454 431 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 MIR557-201ENST00000385239 98 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 RN7SL67P-201ENST00000492147 296 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC095040.1-201ENST00000513286 675 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 MIR4326-201ENST00000582203 59 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 SIGLEC18P-201ENST00000602271 909 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC027612.1-201ENST00000445234 2395 ntBASIC12.93□□□□□ -0.34
NUP43Q8NFH3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC002350.2-201ENST00000623894 1828 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 PTPRVP-205ENST00000641549 5067 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC024075.2-201ENST00000598112 1473 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 RPL8P2-201ENST00000430538 502 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 NUP210P1-202ENST00000504322 710 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC242376.1-201ENST00000559033 726 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 MIR3677-201ENST00000578964 60 ntBASIC12.92□□□□□ -0.34
NUP43Q8NFH3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.92□□□□□ -0.34
NUP43Q8NFH3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms