Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AC114812.4-201ENST00000506676 757 ntBASIC12.56□□□□□ -0.4
CACNA1BQ00975 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AC023157.1-201ENST00000453713 402 ntBASIC12.56□□□□□ -0.4
CACNA1BQ00975 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AL031673.1-201ENST00000611460 466 ntBASIC12.56□□□□□ -0.4
CACNA1BQ00975 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 AC092053.3-201ENST00000641308 4975 ntBASIC12.56□□□□□ -0.4
CACNA1BQ00975 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.56□□□□□ -0.4
CACNA1BQ00975 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CACNA1BQ00975 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 CDC20P1-201ENST00000488829 1500 ntBASIC12.55□□□□□ -0.4
CACNA1BQ00975 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 MBL3P-201ENST00000402234 644 ntBASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 B2M-202ENST00000544417 933 ntTSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ERH-202ENST00000555373 586 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 RN7SL405P-201ENST00000582502 289 ntBASIC12.55□□□□□ -0.4
CACNA1BQ00975 HKR1-222ENST00000591417 525 ntTSL 4 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC144831.1-201ENST00000573312 2656 ntBASIC12.55□□□□□ -0.4
CACNA1BQ00975 KIR2DL4-201ENST00000345540 1447 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CACNA1BQ00975 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC12.55□□□□□ -0.4
CACNA1BQ00975 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms