Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 MEX3B-202ENST00000558133 4333 ntBASIC13.83□□□□□ -0.2
AP1S1P61966 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 FXNP2-201ENST00000411625 547 ntBASIC13.83□□□□□ -0.2
AP1S1P61966 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.83□□□□□ -0.2
AP1S1P61966 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.83□□□□□ -0.2
AP1S1P61966 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.83□□□□□ -0.2
AP1S1P61966 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.83□□□□□ -0.2
AP1S1P61966 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.83□□□□□ -0.2
AP1S1P61966 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP1S1P61966 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 AC104581.4-201ENST00000623126 3052 ntBASIC13.82□□□□□ -0.2
AP1S1P61966 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.82□□□□□ -0.2
AP1S1P61966 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.82□□□□□ -0.2
AP1S1P61966 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.82□□□□□ -0.2
AP1S1P61966 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.82□□□□□ -0.2
AP1S1P61966 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AP1S1P61966 RN7SL736P-201ENST00000613111 269 ntBASIC13.82□□□□□ -0.2
AP1S1P61966 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 AL365181.1-201ENST00000564032 1828 ntBASIC13.82□□□□□ -0.2
AP1S1P61966 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AP1S1P61966 AC004623.1-201ENST00000624592 2127 ntBASIC13.82□□□□□ -0.2
AP1S1P61966 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
AP1S1P61966 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AP1S1P61966 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP1S1P61966 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 AC005014.1-201ENST00000432006 2976 ntBASIC13.81□□□□□ -0.2
AP1S1P61966 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms