Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC3P51654 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC3P51654 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 GULOP-201ENST00000454030 748 ntBASIC15.17■□□□□ 0.02
GPC3P51654 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GPC3P51654 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.17■□□□□ 0.02
GPC3P51654 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
GPC3P51654 GOLGA2P7-209ENST00000560408 745 ntBASIC15.17■□□□□ 0.02
GPC3P51654 MIR3940-201ENST00000579148 102 ntBASIC15.17■□□□□ 0.02
GPC3P51654 AC006483.2-201ENST00000609813 515 ntBASIC15.17■□□□□ 0.02
GPC3P51654 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC3P51654 FO393412.1-201ENST00000619841 382 ntBASIC15.17■□□□□ 0.02
GPC3P51654 AC138466.4-201ENST00000623965 852 ntBASIC15.17■□□□□ 0.02
GPC3P51654 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GPC3P51654 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GPC3P51654 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC3P51654 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC3P51654 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC3P51654 AL365181.3-201ENST00000605886 3222 ntBASIC15.17■□□□□ 0.02
GPC3P51654 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC3P51654 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A21P-201ENST00000510875 1396 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A15P-201ENST00000514465 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A6P-201ENST00000515148 1394 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A16P-201ENST00000526662 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A9P-201ENST00000527940 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A5P-201ENST00000528738 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A14P-201ENST00000530386 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 FAM90A13P-201ENST00000534703 1395 ntBASIC15.16■□□□□ 0.02
GPC3P51654 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 KRT18P46-201ENST00000435568 1279 ntBASIC15.16■□□□□ 0.02
GPC3P51654 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.16■□□□□ 0.02
GPC3P51654 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.16■□□□□ 0.02
GPC3P51654 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
GPC3P51654 AC005777.1-201ENST00000588332 187 ntBASIC15.16■□□□□ 0.02
GPC3P51654 AC011247.3-201ENST00000603297 438 ntBASIC15.16■□□□□ 0.02
GPC3P51654 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 AL359845.1-201ENST00000458202 1648 ntBASIC15.16■□□□□ 0.02
GPC3P51654 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GPC3P51654 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC3P51654 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC3P51654 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GPC3P51654 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms