Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 PEG13-201ENST00000631594 5667 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 EGLN3-205ENST00000547327 2849 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.18□□□□□ -0.14
ERCC2P18074 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 AC026316.1-201ENST00000398900 414 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 AC005077.3-201ENST00000449614 213 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
ERCC2P18074 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.18□□□□□ -0.14
ERCC2P18074 AL132994.1-201ENST00000554098 400 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC2P18074 AL009176.1-201ENST00000607876 650 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.18□□□□□ -0.14
ERCC2P18074 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ERCC2P18074 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ERCC2P18074 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.18□□□□□ -0.14
ERCC2P18074 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.18□□□□□ -0.14
ERCC2P18074 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC2P18074 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC2P18074 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ERCC2P18074 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC2P18074 AC012531.1-201ENST00000562848 2680 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 AC125807.2-201ENST00000513358 3514 ntBASIC14.18□□□□□ -0.14
ERCC2P18074 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.17□□□□□ -0.14
ERCC2P18074 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.17□□□□□ -0.14
ERCC2P18074 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.17□□□□□ -0.14
ERCC2P18074 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.17□□□□□ -0.14
ERCC2P18074 RN7SKP155-201ENST00000516031 288 ntBASIC14.17□□□□□ -0.14
ERCC2P18074 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.17□□□□□ -0.14
ERCC2P18074 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.17□□□□□ -0.14
ERCC2P18074 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 PRKXP1-201ENST00000561423 1122 ntBASIC14.17□□□□□ -0.14
ERCC2P18074 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.17□□□□□ -0.14
ERCC2P18074 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.17□□□□□ -0.14
ERCC2P18074 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 AC007250.1-201ENST00000608934 338 ntBASIC14.17□□□□□ -0.14
ERCC2P18074 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.17□□□□□ -0.14
ERCC2P18074 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.17□□□□□ -0.14
ERCC2P18074 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
ERCC2P18074 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ERCC2P18074 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 MKRN5P-201ENST00000445263 1467 ntBASIC14.17□□□□□ -0.14
ERCC2P18074 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ERCC2P18074 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERCC2P18074 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 AC117503.4-201ENST00000623229 1418 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms