Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.25□□□□□ -0.45
CTLA4P16410 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.25□□□□□ -0.45
CTLA4P16410 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.25□□□□□ -0.45
CTLA4P16410 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.25□□□□□ -0.45
CTLA4P16410 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 AC008132.1-202ENST00000342005 1389 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CTLA4P16410 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 CICP9-201ENST00000444451 1913 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC007336.3-201ENST00000623886 2160 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.24□□□□□ -0.45
CTLA4P16410 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 GPAA1P2-201ENST00000417923 928 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 PDIA3P2-201ENST00000428073 158 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CTLA4P16410 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 AC145285.5-201ENST00000562217 361 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 RN7SL665P-201ENST00000578793 300 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 MIR4265-201ENST00000582152 99 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.24□□□□□ -0.45
CTLA4P16410 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 AL049840.2-201ENST00000602722 535 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.24□□□□□ -0.45
CTLA4P16410 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CTLA4P16410 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CTLA4P16410 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CTLA4P16410 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.23□□□□□ -0.45
CTLA4P16410 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms