Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
CXCL1P09341 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 MARK2P16-201ENST00000605714 1723 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 IL9RP3-201ENST00000442856 1674 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 RCC2P1-201ENST00000452257 1476 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
CXCL1P09341 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 AC093004.1-201ENST00000508850 424 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 DOC2GP-202ENST00000514950 1163 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 ENPP7P5-201ENST00000541031 1031 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.7□□□□□ -0.7
CXCL1P09341 AC004449.1-201ENST00000564240 433 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 AC104794.3-201ENST00000566840 1248 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL1P09341 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 AL121894.2-201ENST00000602977 491 ntBASIC10.7□□□□□ -0.7
CXCL1P09341 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL1P09341 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL1P09341 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL1P09341 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 FAM47DP-201ENST00000402340 3290 ntBASIC10.69□□□□□ -0.7
CXCL1P09341 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.69□□□□□ -0.7
CXCL1P09341 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CXCL1P09341 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.69□□□□□ -0.7
CXCL1P09341 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CXCL1P09341 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC10.69□□□□□ -0.7
CXCL1P09341 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.69□□□□□ -0.7
CXCL1P09341 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 KRT8P28-201ENST00000433288 1390 ntBASIC10.69□□□□□ -0.7
CXCL1P09341 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.69□□□□□ -0.7
CXCL1P09341 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CXCL1P09341 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL1P09341 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms