Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
GAPDHP04406 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
GAPDHP04406 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
GAPDHP04406 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
GAPDHP04406 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PTPRVP-205ENST00000641549 5067 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AC018735.1-201ENST00000437208 1502 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AC103592.1-201ENST00000394513 664 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.61□□□□□ -0.55
GAPDHP04406 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.61□□□□□ -0.55
GAPDHP04406 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC011742.3-201ENST00000439053 820 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC108725.1-201ENST00000495472 409 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 AC044849.1-201ENST00000519737 1188 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC11.61□□□□□ -0.55
GAPDHP04406 AP001258.2-201ENST00000529891 490 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.61□□□□□ -0.55
GAPDHP04406 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AP002353.1-201ENST00000528257 1599 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.61□□□□□ -0.55
GAPDHP04406 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.61□□□□□ -0.55
GAPDHP04406 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 AC124319.4-201ENST00000622931 2161 ntBASIC11.61□□□□□ -0.55
GAPDHP04406 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
GAPDHP04406 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
GAPDHP04406 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
GAPDHP04406 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
GAPDHP04406 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
GAPDHP04406 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
GAPDHP04406 PCDHB17P-202ENST00000623466 3066 ntBASIC11.6□□□□□ -0.55
GAPDHP04406 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
GAPDHP04406 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
GAPDHP04406 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
GAPDHP04406 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GAPDHP04406 AL358781.1-202ENST00000321081 1360 ntBASIC11.6□□□□□ -0.55
GAPDHP04406 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms