Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 AL450468.2-201ENST00000565955 1889 ntBASIC11.61□□□□□ -0.55
CD74P04233 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 AC018629.1-201ENST00000623381 1736 ntBASIC11.6□□□□□ -0.55
CD74P04233 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 AL162615.1-201ENST00000429893 1653 ntBASIC11.6□□□□□ -0.55
CD74P04233 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 AC006001.1-201ENST00000325130 474 ntBASIC11.6□□□□□ -0.55
CD74P04233 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 BCRP1-201ENST00000444246 691 ntBASIC11.6□□□□□ -0.55
CD74P04233 UGT1A2P-201ENST00000454886 866 ntBASIC11.6□□□□□ -0.55
CD74P04233 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.6□□□□□ -0.55
CD74P04233 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.6□□□□□ -0.55
CD74P04233 AC140912.1-201ENST00000577171 1054 ntBASIC11.6□□□□□ -0.55
CD74P04233 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.6□□□□□ -0.55
CD74P04233 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 POM121L7P-201ENST00000329949 2404 ntBASIC11.6□□□□□ -0.55
CD74P04233 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.6□□□□□ -0.55
CD74P04233 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CD74P04233 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD74P04233 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CD74P04233 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 EGLN3-205ENST00000547327 2849 ntBASIC11.59□□□□□ -0.55
CD74P04233 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 FP325330.2-201ENST00000624219 5630 ntBASIC11.59□□□□□ -0.55
CD74P04233 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.59□□□□□ -0.55
CD74P04233 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD74P04233 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CD74P04233 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms