Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 BNIP3P41-202ENST00000616656 861 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC020917.4-201ENST00000623994 1999 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 GUSBP10-201ENST00000417412 665 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 NOC2LP1-201ENST00000450578 752 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 RPS2P36-201ENST00000456516 831 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 RN7SL564P-201ENST00000496309 250 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 MIR4706-201ENST00000582134 82 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 MIR2392-201ENST00000584881 84 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AP005264.5-201ENST00000590066 467 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 AL049840.2-201ENST00000602722 535 ntBASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD3Q7Z3D4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC074138.1-201ENST00000611182 1303 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC135782.3-201ENST00000562782 2105 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 HLA-DMA-203ENST00000395305 777 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AL391647.1-201ENST00000395664 511 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms