Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CLDN6P56747 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC13.21□□□□□ -0.3
CLDN6P56747 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDN6P56747 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CLDN6P56747 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDN6P56747 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN6P56747 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDN6P56747 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLDN6P56747 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.3
CLDN6P56747 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN6P56747 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN6P56747 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN6P56747 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN6P56747 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN6P56747 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 HLA-DMA-202ENST00000395303 1007 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN6P56747 AC104212.2-201ENST00000478813 628 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 AC112250.1-201ENST00000504640 745 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 AC004801.1-201ENST00000549557 360 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.2□□□□□ -0.3
CLDN6P56747 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 CSTP2-201ENST00000610599 398 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 AC123912.6-201ENST00000612657 315 ntBASIC13.2□□□□□ -0.3
CLDN6P56747 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN6P56747 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN6P56747 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN6P56747 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN6P56747 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN6P56747 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CLDN6P56747 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 AC005840.4-201ENST00000541242 2494 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 CCL25-202ENST00000315626 450 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN6P56747 AC098657.1-201ENST00000416270 1135 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN6P56747 AL773545.2-201ENST00000442149 472 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN6P56747 PEBP1P3-201ENST00000455475 548 ntBASIC13.19□□□□□ -0.3
CLDN6P56747 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN6P56747 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN6P56747 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms