Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CLCN1P35523 CROCCP4-201ENST00000457096 498 ntBASIC15.77■□□□□ 0.12
CLCN1P35523 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCN1P35523 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
CLCN1P35523 RN7SL713P-201ENST00000582127 302 ntBASIC15.77■□□□□ 0.12
CLCN1P35523 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.77■□□□□ 0.12
CLCN1P35523 CR392039.2-201ENST00000623182 509 ntBASIC15.77■□□□□ 0.12
CLCN1P35523 AC138951.2-201ENST00000623455 1161 ntBASIC15.77■□□□□ 0.12
CLCN1P35523 AC002472.3-201ENST00000640124 621 ntBASIC15.77■□□□□ 0.12
CLCN1P35523 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CLCN1P35523 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLCN1P35523 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLCN1P35523 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CLCN1P35523 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.76■□□□□ 0.11
CLCN1P35523 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCN1P35523 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.76■□□□□ 0.11
CLCN1P35523 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCN1P35523 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 KATNBL1P4-201ENST00000503545 918 ntBASIC15.76■□□□□ 0.11
CLCN1P35523 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.76■□□□□ 0.11
CLCN1P35523 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.76■□□□□ 0.11
CLCN1P35523 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCN1P35523 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.76■□□□□ 0.11
CLCN1P35523 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 NT5C3AP1-202ENST00000441170 1663 ntBASIC15.76■□□□□ 0.11
CLCN1P35523 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLCN1P35523 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLCN1P35523 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLCN1P35523 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLCN1P35523 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CLCN1P35523 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLCN1P35523 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC15.75■□□□□ 0.11
CLCN1P35523 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC15.75■□□□□ 0.11
CLCN1P35523 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms