Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC018755.1-201ENST00000601315 1182 ntBASIC17.42■□□□□ 0.38
RXRBP28702 OR4C3-202ENST00000611380 597 ntBASIC17.42■□□□□ 0.38
RXRBP28702 MIR6750-201ENST00000617817 75 ntBASIC17.42■□□□□ 0.38
RXRBP28702 AL137784.3-201ENST00000623858 2288 ntBASIC17.42■□□□□ 0.38
RXRBP28702 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.42■□□□□ 0.38
RXRBP28702 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC17.42■□□□□ 0.38
RXRBP28702 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RXRBP28702 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 PHBP11-201ENST00000420550 809 ntBASIC17.41■□□□□ 0.38
RXRBP28702 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC17.41■□□□□ 0.38
RXRBP28702 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC17.41■□□□□ 0.38
RXRBP28702 AC090772.2-201ENST00000578443 564 ntTSL 4 BASIC17.41■□□□□ 0.38
RXRBP28702 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC17.41■□□□□ 0.38
RXRBP28702 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RXRBP28702 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RXRBP28702 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RXRBP28702 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.4■□□□□ 0.38
RXRBP28702 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 HNRNPA1P34-201ENST00000391992 950 ntBASIC17.4■□□□□ 0.38
RXRBP28702 ALDOAP2-201ENST00000398050 1076 ntBASIC17.4■□□□□ 0.38
RXRBP28702 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 AC073472.1-201ENST00000441433 803 ntBASIC17.4■□□□□ 0.38
RXRBP28702 AC022447.6-201ENST00000515522 438 ntBASIC17.4■□□□□ 0.38
RXRBP28702 NAA38-204ENST00000575208 529 ntTSL 3 BASIC17.4■□□□□ 0.38
RXRBP28702 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AC007728.3-201ENST00000602304 746 ntBASIC17.4■□□□□ 0.38
RXRBP28702 AL731555.1-201ENST00000634547 1259 ntBASIC17.4■□□□□ 0.38
RXRBP28702 AC083841.4-201ENST00000637396 352 ntBASIC17.4■□□□□ 0.38
RXRBP28702 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.4■□□□□ 0.38
RXRBP28702 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RXRBP28702 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.4■□□□□ 0.38
RXRBP28702 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.4■□□□□ 0.38
RXRBP28702 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
RXRBP28702 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RXRBP28702 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RXRBP28702 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms