Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 RN7SL574P-201ENST00000581512 297 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC006372.4-201ENST00000624122 1543 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 KRT18P9-201ENST00000604826 1300 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FLJ16779-201ENST00000612722 7638 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FTH1P22-201ENST00000456305 520 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC242376.1-201ENST00000559033 726 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC145285.5-201ENST00000562217 361 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC020914.3-201ENST00000594712 304 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AC243960.2-201ENST00000600996 747 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 Z82244.1-201ENST00000631502 840 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 AOC4P-203ENST00000566825 2289 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 ODCP-201ENST00000459650 1639 ntBASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.59□□□□□ -0.39
RSPO3Q9BXY4 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RSPO3Q9BXY4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
RSPO3Q9BXY4 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.58□□□□□ -0.39
RSPO3Q9BXY4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 GBAP1-208ENST00000566701 1546 ntBASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RSPO3Q9BXY4 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms