Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AC136604.1-202ENST00000425471 771 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AC079112.1-201ENST00000454972 939 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AL118522.1-201ENST00000611368 560 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 GDA-203ENST00000376986 1771 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 FXNP2-201ENST00000411625 547 ntBASIC19.86■□□□□ 0.77
SIN3AQ96ST3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 GULOP-201ENST00000454030 748 ntBASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC226150.1-201ENST00000544259 466 ntBASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC026120.2-201ENST00000617239 309 ntBASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 AL513497.1-201ENST00000624273 2083 ntBASIC19.86■□□□□ 0.77
SIN3AQ96ST3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC19.86■□□□□ 0.77
SIN3AQ96ST3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 PCDHB19P-202ENST00000625133 2914 ntBASIC19.85■□□□□ 0.77
SIN3AQ96ST3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 AC079250.1-201ENST00000456046 531 ntBASIC19.85■□□□□ 0.77
SIN3AQ96ST3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.85■□□□□ 0.77
SIN3AQ96ST3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 GBAP1-208ENST00000566701 1546 ntBASIC19.85■□□□□ 0.77
SIN3AQ96ST3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SIN3AQ96ST3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms