Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RN7SL147P-201ENST00000487345 298 ntBASIC16.18■□□□□ 0.18
TRIM47Q96LD4 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 CES1P2-201ENST00000566467 1242 ntBASIC16.18■□□□□ 0.18
TRIM47Q96LD4 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM47Q96LD4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 AL080243.1-201ENST00000423293 1060 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 AC025186.1-201ENST00000478174 870 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 AC092612.1-201ENST00000514501 998 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 AC005586.2-201ENST00000563946 837 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.17■□□□□ 0.18
TRIM47Q96LD4 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM47Q96LD4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 CCT8L1P-201ENST00000465400 1674 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 PGAM1P11-201ENST00000416729 680 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 STK24P1-201ENST00000455035 1291 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC092896.1-201ENST00000465850 380 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 BCL2L12P1-201ENST00000508390 733 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms