Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 HMGA1P1-201ENST00000415560 1062 ntBASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 RNA5SP421-201ENST00000516864 134 ntBASIC12.01□□□□□ -0.49
BEST4Q8NFU0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AL512310.5-201ENST00000551999 515 ntBASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 TNKS-213ENST00000522110 2900 ntBASIC12.01□□□□□ -0.49
BEST4Q8NFU0 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12□□□□□ -0.49
BEST4Q8NFU0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12□□□□□ -0.49
BEST4Q8NFU0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 SERBP1P5-201ENST00000510079 1181 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 AP003171.2-201ENST00000528208 925 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12□□□□□ -0.49
BEST4Q8NFU0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12□□□□□ -0.49
BEST4Q8NFU0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12□□□□□ -0.49
BEST4Q8NFU0 AC008494.3-201ENST00000606615 944 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12□□□□□ -0.49
BEST4Q8NFU0 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 AL590824.1-201ENST00000403828 1349 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 AC025183.3-201ENST00000623526 1482 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 REXO1L6P-201ENST00000603433 1515 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
BEST4Q8NFU0 DBIL5P-203ENST00000536214 2677 ntBASIC12□□□□□ -0.49
BEST4Q8NFU0 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
BEST4Q8NFU0 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12□□□□□ -0.49
BEST4Q8NFU0 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.99□□□□□ -0.49
BEST4Q8NFU0 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BEST4Q8NFU0 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
BEST4Q8NFU0 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms