Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 PPT1-213ENST00000641319 2388 ntBASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 AC061965.1-201ENST00000560524 1465 ntBASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM48Q8IWZ4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC092638.2-201ENST00000441105 947 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MIR4265-201ENST00000582152 99 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MIR6842-201ENST00000612539 65 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 BAP1-211ENST00000615113 489 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC025262.2-201ENST00000623975 1056 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 AC118758.2-201ENST00000614242 2813 ntBASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM48Q8IWZ4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AC090643.2-201ENST00000623442 2029 ntBASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 KRT8P2-201ENST00000556193 944 ntBASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM48Q8IWZ4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms