Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01559Q495D7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01559Q495D7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01559Q495D7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01559Q495D7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01559Q495D7 PSMC1P6-201ENST00000477233 1319 ntBASIC10.84□□□□□ -0.67
LINC01559Q495D7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01559Q495D7 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.67
LINC01559Q495D7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
LINC01559Q495D7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC004241.5-201ENST00000623870 2448 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 Y_RNA.318-201ENST00000365131 97 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 TREML5P-201ENST00000421694 576 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 MEP1AP4-201ENST00000423244 1087 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC004590.1-201ENST00000502435 510 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 Y_RNA.655-201ENST00000515919 96 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC024681.1-201ENST00000521917 487 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 TPRX2P-201ENST00000535362 881 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AL355493.4-201ENST00000618530 292 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AC006927.3-201ENST00000638789 384 ntBASIC10.83□□□□□ -0.68
LINC01559Q495D7 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01559Q495D7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01559Q495D7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01559Q495D7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01559Q495D7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01559Q495D7 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01559Q495D7 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01559Q495D7 AC005562.1-201ENST00000583030 3219 ntBASIC10.82□□□□□ -0.68
LINC01559Q495D7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
LINC01559Q495D7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01559Q495D7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01559Q495D7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms