Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ATP7AQ04656 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 PRADC1P1-201ENST00000412317 525 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 HNRNPA1P68-201ENST00000425806 979 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 BCRP5-201ENST00000514371 253 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP7AQ04656 AL606834.1-201ENST00000553836 1169 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 AC090825.2-201ENST00000557959 739 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 IGHV1OR16-3-201ENST00000568138 205 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP7AQ04656 SNORD55-201ENST00000581525 80 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 MIR4640-201ENST00000581824 90 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP7AQ04656 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 AC073862.3-201ENST00000624597 1648 ntBASIC19.68■□□□□ 0.74
ATP7AQ04656 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATP7AQ04656 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP7AQ04656 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
ATP7AQ04656 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 AC005549.1-201ENST00000579438 1629 ntBASIC19.67■□□□□ 0.74
ATP7AQ04656 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC19.67■□□□□ 0.74
ATP7AQ04656 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC19.67■□□□□ 0.74
ATP7AQ04656 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 AC090616.6-202ENST00000583601 1088 ntBASIC19.67■□□□□ 0.74
ATP7AQ04656 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP7AQ04656 OR4C3-202ENST00000611380 597 ntBASIC19.67■□□□□ 0.74
ATP7AQ04656 BIN3-212ENST00000640731 450 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP7AQ04656 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 AC023830.3-201ENST00000612995 1455 ntBASIC19.67■□□□□ 0.74
ATP7AQ04656 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP7AQ04656 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP7AQ04656 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ATP7AQ04656 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP7AQ04656 AL627095.1-201ENST00000414775 321 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP7AQ04656 AC012066.1-201ENST00000439252 694 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 AC139143.1-201ENST00000441772 1207 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP7AQ04656 FTLP16-201ENST00000446400 513 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 FPGT-205ENST00000482102 561 ntTSL 4 BASIC19.66■□□□□ 0.74
ATP7AQ04656 FP325317.1-201ENST00000539936 1042 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 RPSAP67-201ENST00000584105 862 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 RN7SL341P-201ENST00000613745 298 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP7AQ04656 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATP7AQ04656 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATP7AQ04656 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP7AQ04656 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP7AQ04656 TPM3P7-201ENST00000338274 732 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 SPTLC1P3-201ENST00000403408 259 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms