Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 AC005912.2-201ENST00000619492 2400 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCA2P51587 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCA2P51587 AL353997.3-201ENST00000586597 589 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCA2P51587 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
BRCA2P51587 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 AC099689.1-201ENST00000624383 1302 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 ARF1P2-201ENST00000392493 538 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 TRBV22-1-201ENST00000424543 337 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 AC010677.1-201ENST00000441690 412 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 HNRNPA1P69-201ENST00000552536 933 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC14.78□□□□□ -0.04
BRCA2P51587 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
BRCA2P51587 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCA2P51587 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCA2P51587 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
BRCA2P51587 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC14.77□□□□□ -0.04
BRCA2P51587 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC14.77□□□□□ -0.04
BRCA2P51587 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.77□□□□□ -0.04
BRCA2P51587 uc_338.24-201ENST00000617802 182 ntBASIC14.77□□□□□ -0.04
BRCA2P51587 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BRCA2P51587 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BRCA2P51587 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BRCA2P51587 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC14.77□□□□□ -0.05
BRCA2P51587 CYP2B7P-201ENST00000541697 1476 ntBASIC14.77□□□□□ -0.05
BRCA2P51587 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
BRCA2P51587 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
BRCA2P51587 SSR4P1-201ENST00000415143 412 ntBASIC14.77□□□□□ -0.05
BRCA2P51587 TSACC-206ENST00000466306 477 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCA2P51587 AC096919.1-201ENST00000472730 652 ntBASIC14.77□□□□□ -0.05
BRCA2P51587 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC14.77□□□□□ -0.05
BRCA2P51587 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC14.77□□□□□ -0.05
BRCA2P51587 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCA2P51587 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC14.77□□□□□ -0.05
BRCA2P51587 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC14.77□□□□□ -0.05
BRCA2P51587 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCA2P51587 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 TEDDM2P-201ENST00000414169 786 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC14.76□□□□□ -0.05
BRCA2P51587 PFN1P10-201ENST00000455962 327 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 AC098591.1-202ENST00000507914 937 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC14.76□□□□□ -0.05
BRCA2P51587 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 AC090950.1-202ENST00000605733 644 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCA2P51587 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCA2P51587 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
BRCA2P51587 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 AC007312.1-201ENST00000427493 258 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 AC006987.4-201ENST00000430032 279 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC14.76□□□□□ -0.05
BRCA2P51587 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCA2P51587 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms