Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.16■□□□□ 0.34
COL15A1P39059 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 YY1P2-201ENST00000438766 948 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.16■□□□□ 0.34
COL15A1P39059 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC17.16■□□□□ 0.34
COL15A1P39059 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 AC006986.1-201ENST00000612764 241 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 AC008622.3-201ENST00000621170 600 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 AC034205.3-201ENST00000603595 1376 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 FAM90A12P-201ENST00000519497 2375 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 FAM90A24P-201ENST00000520792 2369 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 AP000437.1-201ENST00000624057 2085 ntBASIC17.16■□□□□ 0.34
COL15A1P39059 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.16■□□□□ 0.34
COL15A1P39059 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL15A1P39059 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 MIR339-201ENST00000362153 94 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL15A1P39059 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 SNORA50D-201ENST00000408059 134 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.15■□□□□ 0.34
COL15A1P39059 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 CDKN2A-AS1-201ENST00000441769 823 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 RPL35P1-201ENST00000450819 370 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 TPT1P6-201ENST00000458298 514 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 AC114812.4-201ENST00000506676 757 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.15■□□□□ 0.34
COL15A1P39059 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 AC106782.5-201ENST00000616011 337 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 BX322562.1-201ENST00000617004 561 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 AL121753.2-201ENST00000624581 1461 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL15A1P39059 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.15■□□□□ 0.34
COL15A1P39059 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 AC010900.1-201ENST00000449849 1296 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 AC026412.1-206ENST00000502273 206 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.15■□□□□ 0.34
COL15A1P39059 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC17.15■□□□□ 0.34
COL15A1P39059 AC133555.4-201ENST00000569081 152 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 RN7SL440P-201ENST00000577855 343 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms