Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.13□□□□□ -0.15
FDFT1P37268 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 MEG3_2.1-201ENST00000611456 105 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 MIR6769A-201ENST00000617340 73 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 TUBBP5-203ENST00000508529 1334 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 GHET1-201ENST00000627071 1906 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AP000437.1-201ENST00000624057 2085 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.12□□□□□ -0.15
FDFT1P37268 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 KLF17P1-201ENST00000547105 1126 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 LINC01783-202ENST00000614408 828 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 BX284668.2-205ENST00000619677 828 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.12□□□□□ -0.15
FDFT1P37268 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
FDFT1P37268 AC138761.6-201ENST00000583997 1423 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AC104758.3-203ENST00000562938 2123 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.12□□□□□ -0.15
FDFT1P37268 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 AC004899.2-201ENST00000622993 3860 ntBASIC14.12□□□□□ -0.15
FDFT1P37268 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
FDFT1P37268 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FDFT1P37268 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FDFT1P37268 ELK2AP-201ENST00000392510 1007 ntBASIC14.11□□□□□ -0.15
FDFT1P37268 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 ACTBP11-201ENST00000436287 1126 ntBASIC14.11□□□□□ -0.15
FDFT1P37268 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 PES1P2-201ENST00000449745 1735 ntBASIC14.11□□□□□ -0.15
FDFT1P37268 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.11□□□□□ -0.15
FDFT1P37268 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms