Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AP001184.1-201ENST00000637936 376 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.22□□□□□ -0.13
ERCC2P18074 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ERCC2P18074 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ERCC2P18074 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ERCC2P18074 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ERCC2P18074 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 AC019294.4-201ENST00000561777 2905 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC2P18074 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ERCC2P18074 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 KRT8P19-201ENST00000551916 1455 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ERCC2P18074 OR2W2P-201ENST00000406313 909 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 GUSBP10-201ENST00000417412 665 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 AC136604.1-202ENST00000425471 771 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.21□□□□□ -0.13
ERCC2P18074 EEF1DP6-201ENST00000449232 372 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 HERC2P11-201ENST00000562845 725 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.21□□□□□ -0.13
ERCC2P18074 AC100756.2-201ENST00000569537 736 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.21□□□□□ -0.13
ERCC2P18074 SNORD3B-1-201ENST00000577988 758 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 AC138894.2-201ENST00000602838 371 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 AC084781.1-201ENST00000613737 656 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.21□□□□□ -0.13
ERCC2P18074 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC2P18074 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ERCC2P18074 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ERCC2P18074 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.21□□□□□ -0.13
ERCC2P18074 AC114271.1-201ENST00000612689 2813 ntBASIC14.21□□□□□ -0.14
ERCC2P18074 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.21□□□□□ -0.14
ERCC2P18074 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 AC004241.5-201ENST00000623870 2448 ntBASIC14.21□□□□□ -0.14
ERCC2P18074 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.21□□□□□ -0.14
ERCC2P18074 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ERCC2P18074 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ERCC2P18074 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.21□□□□□ -0.14
ERCC2P18074 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 AC073862.5-201ENST00000624129 2027 ntBASIC14.2□□□□□ -0.14
ERCC2P18074 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ERCC2P18074 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.2□□□□□ -0.14
ERCC2P18074 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ERCC2P18074 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.2□□□□□ -0.14
ERCC2P18074 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ERCC2P18074 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms