Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PKHD1P08F94 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
PKHD1P08F94 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 AC244154.1-201ENST00000620148 1555 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
PKHD1P08F94 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 APTX-203ENST00000379813 1121 ntTSL 5 BASIC8.4□□□□□ -1.06
PKHD1P08F94 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 INO80C-203ENST00000441607 904 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 AC023157.1-201ENST00000453713 402 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 AC091893.1-201ENST00000503772 399 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 CLUHP3-207ENST00000563678 1303 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PKHD1P08F94 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC8.4□□□□□ -1.06
PKHD1P08F94 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 PPATP1-201ENST00000496669 1547 ntBASIC8.4□□□□□ -1.06
PKHD1P08F94 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC8.4□□□□□ -1.06
PKHD1P08F94 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 SRL-202ENST00000537996 1814 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC8.4□□□□□ -1.07
PKHD1P08F94 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
PKHD1P08F94 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 KRT41P-201ENST00000393988 1293 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 ALDOAP2-201ENST00000398050 1076 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC8.4□□□□□ -1.07
PKHD1P08F94 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC8.4□□□□□ -1.07
PKHD1P08F94 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 AL158824.1-201ENST00000451825 450 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC8.4□□□□□ -1.07
PKHD1P08F94 PRAMEF35P-201ENST00000458709 891 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC8.4□□□□□ -1.07
PKHD1P08F94 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 MIR1914-201ENST00000607800 80 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 AC108673.2-201ENST00000608909 565 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC8.4□□□□□ -1.07
PKHD1P08F94 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
PKHD1P08F94 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC8.4□□□□□ -1.07
PKHD1P08F94 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PKHD1P08F94 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
PKHD1P08F94 DDX6P2-201ENST00000619520 1455 ntBASIC8.4□□□□□ -1.07
PKHD1P08F94 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC8.39□□□□□ -1.07
PKHD1P08F94 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC8.39□□□□□ -1.07
PKHD1P08F94 AKIRIN1P2-201ENST00000440655 570 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 AC003072.1-201ENST00000510957 612 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 IGHV3-6-201ENST00000518407 347 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC8.39□□□□□ -1.07
PKHD1P08F94 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC8.39□□□□□ -1.07
PKHD1P08F94 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC8.39□□□□□ -1.07
PKHD1P08F94 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 BAP1-211ENST00000615113 489 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
PKHD1P08F94 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC8.39□□□□□ -1.07
PKHD1P08F94 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC8.39□□□□□ -1.07
PKHD1P08F94 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PKHD1P08F94 MPI-208ENST00000563786 1707 ntTSL 5 BASIC8.39□□□□□ -1.07
PKHD1P08F94 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PKHD1P08F94 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PKHD1P08F94 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC8.39□□□□□ -1.07
PKHD1P08F94 AC091132.3-201ENST00000579701 470 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 AC138645.1-201ENST00000582765 470 ntBASIC8.39□□□□□ -1.07
PKHD1P08F94 AC007728.3-201ENST00000602304 746 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms