Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 Z98885.3-201ENST00000624882 1757 ntBASIC15.57■□□□□ 0.08
TPM3P06753 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.56■□□□□ 0.08
TPM3P06753 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM3P06753 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TPM3P06753 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TPM3P06753 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 AC016694.1-201ENST00000434179 700 ntBASIC15.56■□□□□ 0.08
TPM3P06753 CHMP1AP1-201ENST00000445563 662 ntBASIC15.56■□□□□ 0.08
TPM3P06753 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM3P06753 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 TP53TG3HP-202ENST00000569755 579 ntBASIC15.56■□□□□ 0.08
TPM3P06753 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.56■□□□□ 0.08
TPM3P06753 AC015936.2-201ENST00000593177 259 ntBASIC15.56■□□□□ 0.08
TPM3P06753 AP001462.1-201ENST00000594089 452 ntBASIC15.56■□□□□ 0.08
TPM3P06753 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM3P06753 AL022328.1-201ENST00000610050 478 ntBASIC15.56■□□□□ 0.08
TPM3P06753 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TPM3P06753 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
TPM3P06753 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM3P06753 AC092028.1-202ENST00000641483 3547 ntBASIC15.56■□□□□ 0.08
TPM3P06753 AC092028.1-201ENST00000641781 3540 ntBASIC15.56■□□□□ 0.08
TPM3P06753 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TPM3P06753 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM3P06753 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.55■□□□□ 0.08
TPM3P06753 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 AC008040.5-201ENST00000599781 1781 ntBASIC15.55■□□□□ 0.08
TPM3P06753 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 AC092933.1-201ENST00000393644 945 ntBASIC15.55■□□□□ 0.08
TPM3P06753 TUBB2BP1-201ENST00000404155 871 ntBASIC15.55■□□□□ 0.08
TPM3P06753 AP006294.1-201ENST00000415407 339 ntBASIC15.55■□□□□ 0.08
TPM3P06753 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 FAM58BP-201ENST00000439056 645 ntBASIC15.55■□□□□ 0.08
TPM3P06753 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.55■□□□□ 0.08
TPM3P06753 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
TPM3P06753 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.55■□□□□ 0.08
TPM3P06753 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TPM3P06753 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM3P06753 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPM3P06753 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TPM3P06753 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
TPM3P06753 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 IL9RP3-201ENST00000442856 1674 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms