Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.12□□□□□ -0.63
UPK2O00526 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.12□□□□□ -0.63
UPK2O00526 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.12□□□□□ -0.63
UPK2O00526 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.12□□□□□ -0.63
UPK2O00526 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.12□□□□□ -0.63
UPK2O00526 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 NAP1L6-202ENST00000641404 1222 ntBASIC11.12□□□□□ -0.63
UPK2O00526 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 OR2I1P-208ENST00000641137 4948 ntBASIC11.12□□□□□ -0.63
UPK2O00526 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.12□□□□□ -0.63
UPK2O00526 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.12□□□□□ -0.63
UPK2O00526 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
UPK2O00526 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 TBC1D27-202ENST00000424239 1573 ntBASIC11.11□□□□□ -0.63
UPK2O00526 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
UPK2O00526 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.11□□□□□ -0.63
UPK2O00526 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.11□□□□□ -0.63
UPK2O00526 NKAIN1P1-201ENST00000435754 582 ntBASIC11.11□□□□□ -0.63
UPK2O00526 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.11□□□□□ -0.63
UPK2O00526 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.11□□□□□ -0.63
UPK2O00526 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.11□□□□□ -0.63
UPK2O00526 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UPK2O00526 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
UPK2O00526 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UPK2O00526 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms