Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 IGHV3-6-201ENST00000518407 347 ntBASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 FP325317.1-201ENST00000539936 1042 ntBASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AL606834.1-201ENST00000553836 1169 ntBASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 KRT18P45-201ENST00000515347 1333 ntBASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SOD1-202ENST00000389995 865 ntTSL 3 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 OR7E37P-201ENST00000421076 897 ntBASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 AC139143.1-201ENST00000441772 1207 ntBASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 FOS-205ENST00000555242 629 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 HRC-203ENST00000595625 2044 ntTSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC17.06■□□□□ 0.32
SHANK3Q9BYB0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 ASS1P9-201ENST00000513426 1236 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 AC090825.2-201ENST00000557959 739 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 AC103810.4-201ENST00000578601 257 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 AC005840.4-201ENST00000541242 2494 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 FAM90A27P-201ENST00000593323 1370 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 FAM90A28P-202ENST00000597191 1374 ntBASIC17.05■□□□□ 0.32
SHANK3Q9BYB0 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHANK3Q9BYB0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms