Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC16.06■□□□□ 0.16
CHAMP1Q96JM3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 BOLA2P3-201ENST00000404566 256 ntBASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 MIR1908-201ENST00000410394 80 ntBASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 AC093752.3-201ENST00000567343 901 ntBASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHAMP1Q96JM3 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 KRT8P43-201ENST00000406052 1458 ntBASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 AC104590.1-202ENST00000558368 1921 ntBASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 TUBB2BP1-201ENST00000404155 871 ntBASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHAMP1Q96JM3 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms