Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 AL354861.3-201ENST00000600140 2412 ntBASIC12.02□□□□□ -0.48
BEST4Q8NFU0 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.02□□□□□ -0.48
BEST4Q8NFU0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 FAM8A4P-201ENST00000435433 1213 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 KRT18P15-201ENST00000458108 1291 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AC005498.2-205ENST00000593218 784 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 ECM1P1-201ENST00000604092 1279 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AC004233.3-201ENST00000607794 1269 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AC132938.4-201ENST00000623835 848 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AL033527.5-201ENST00000641382 801 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 SHC1P1-201ENST00000425230 1745 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BEST4Q8NFU0 RCC2P1-201ENST00000452257 1476 ntBASIC12.02□□□□□ -0.49
BEST4Q8NFU0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BEST4Q8NFU0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms