Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AL391647.1-201ENST00000395664 511 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 MIR1307-201ENST00000408840 149 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 HLA-DQB2-229ENST00000411527 1059 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 SCARNA12-201ENST00000459155 270 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 IMP3P2-201ENST00000489760 475 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AC019193.1-201ENST00000506678 823 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 CHMP4BP1-201ENST00000556017 588 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 MIR3907-201ENST00000579424 151 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 AC093462.1-201ENST00000621167 1683 ntBASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CCDC144NLQ6NUI1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 FMO6P-201ENST00000236166 1620 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 OR5BD1P-201ENST00000532527 817 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 KLF17P1-201ENST00000547105 1126 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 MIR4265-201ENST00000582152 99 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AL356740.1-201ENST00000602192 1297 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AC005632.3-201ENST00000605544 308 ntBASIC11.28□□□□□ -0.6
CCDC144NLQ6NUI1 AL359091.4-201ENST00000610052 409 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms