Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AL031577.1-201ENST00000339867 399 ntBASIC16.09■□□□□ 0.17
CNTNAP1P78357 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 SERPINB8P1-201ENST00000401898 377 ntBASIC16.09■□□□□ 0.17
CNTNAP1P78357 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AL049792.1-201ENST00000424708 1262 ntBASIC16.09■□□□□ 0.17
CNTNAP1P78357 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AL137077.1-201ENST00000442115 528 ntBASIC16.09■□□□□ 0.17
CNTNAP1P78357 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.09■□□□□ 0.17
CNTNAP1P78357 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNTNAP1P78357 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CNTNAP1P78357 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.08■□□□□ 0.17
CNTNAP1P78357 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNTNAP1P78357 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CNTNAP1P78357 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
CNTNAP1P78357 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.08■□□□□ 0.17
CNTNAP1P78357 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 POLR3DP1-201ENST00000398689 1176 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AC026271.1-201ENST00000447794 1348 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 RPL3P9-201ENST00000463217 1183 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 RN7SL479P-201ENST00000472003 300 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 RN7SL638P-201ENST00000494527 290 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 KRT18P42-201ENST00000505048 1255 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AC106872.9-201ENST00000512437 1393 ntBASIC16.08■□□□□ 0.16
CNTNAP1P78357 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CNTNAP1P78357 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNTNAP1P78357 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CNTNAP1P78357 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.07■□□□□ 0.16
CNTNAP1P78357 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNTNAP1P78357 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CNTNAP1P78357 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms