Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC019294.4-201ENST00000561777 2905 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 OR2K2-202ENST00000374428 1038 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC007274.1-201ENST00000439805 662 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 Z97180.1-201ENST00000445173 988 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC005077.2-201ENST00000449786 690 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 MIR3677-201ENST00000578964 60 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC244093.1-201ENST00000610837 814 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 AL031673.1-201ENST00000611460 466 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 AL353770.1-201ENST00000614915 403 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 AP001505.2-201ENST00000616815 443 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC009145.4-201ENST00000625119 1294 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H3AP68431 PDXDC2P-206ENST00000534700 1315 ntBASIC12.1□□□□□ -0.47
HIST1H3AP68431 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H3AP68431 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms