Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 AC020931.1-201ENST00000589622 1346 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 RNA5SP491-201ENST00000362936 118 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 MIR632-201ENST00000385193 94 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 VDAC1P11-201ENST00000458323 852 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 ALG1L15P-201ENST00000482834 794 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 RN7SL524P-201ENST00000581152 300 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 AC113385.2-201ENST00000614465 762 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 AC005746.3-201ENST00000614751 393 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 AL357143.1-203ENST00000639750 881 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
CLDN6P56747 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN6P56747 SHMT1P1-201ENST00000419974 1312 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
CLDN6P56747 AL137244.1-201ENST00000422931 865 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 AC005722.1-201ENST00000431878 964 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 RPSAP12-201ENST00000435879 888 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 MAGEA7P-201ENST00000436482 942 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN6P56747 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDN6P56747 AC132812.1-201ENST00000583145 892 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN6P56747 MIR6074-201ENST00000612054 107 ntBASIC13.23□□□□□ -0.29
CLDN6P56747 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN6P56747 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN6P56747 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLDN6P56747 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms