Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC020922.3-201ENST00000595064 547 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CHRNA3P32297 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CHRNA3P32297 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
CHRNA3P32297 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 TSPY25P-201ENST00000429463 745 ntBASIC14.64□□□□□ -0.07
CHRNA3P32297 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNA3P32297 AC092580.1-201ENST00000433998 658 ntBASIC14.64□□□□□ -0.07
CHRNA3P32297 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.64□□□□□ -0.07
CHRNA3P32297 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.64□□□□□ -0.07
CHRNA3P32297 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNA3P32297 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CHRNA3P32297 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.64□□□□□ -0.07
CHRNA3P32297 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.64□□□□□ -0.07
CHRNA3P32297 AF254983.2-201ENST00000612331 135 ntBASIC14.64□□□□□ -0.07
CHRNA3P32297 AL353770.1-201ENST00000614915 403 ntBASIC14.64□□□□□ -0.07
CHRNA3P32297 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 AP003969.2-201ENST00000623739 2275 ntBASIC14.64□□□□□ -0.07
CHRNA3P32297 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNA3P32297 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CHRNA3P32297 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNA3P32297 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 Z98885.3-201ENST00000624882 1757 ntBASIC14.63□□□□□ -0.07
CHRNA3P32297 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 AC007274.2-201ENST00000421675 662 ntBASIC14.63□□□□□ -0.07
CHRNA3P32297 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.63□□□□□ -0.07
CHRNA3P32297 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRNA3P32297 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms