Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 PCDHA6-201ENST00000378126 3267 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ERCC2P18074 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.23□□□□□ -0.13
ERCC2P18074 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 STK24P1-201ENST00000455035 1291 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 RN7SL564P-201ENST00000496309 250 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
ERCC2P18074 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 OR5BD1P-201ENST00000532527 817 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.23□□□□□ -0.13
ERCC2P18074 KRT8P2-201ENST00000556193 944 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.23□□□□□ -0.13
ERCC2P18074 AC012073.1-201ENST00000606114 1108 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 AC103810.10-201ENST00000606504 343 ntBASIC14.23□□□□□ -0.13
ERCC2P18074 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERCC2P18074 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ERCC2P18074 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ERCC2P18074 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.22□□□□□ -0.13
ERCC2P18074 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ERCC2P18074 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
ERCC2P18074 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ERCC2P18074 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 AL512430.1-201ENST00000392575 860 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 HLA-DMA-203ENST00000395305 777 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.22□□□□□ -0.13
ERCC2P18074 CHCHD2P9-201ENST00000461726 456 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.22□□□□□ -0.13
ERCC2P18074 RN7SL767P-201ENST00000493013 295 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 AC019193.1-201ENST00000506678 823 ntBASIC14.22□□□□□ -0.13
ERCC2P18074 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.22□□□□□ -0.13
ERCC2P18074 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.22□□□□□ -0.13
ERCC2P18074 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.22□□□□□ -0.13
ERCC2P18074 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.22□□□□□ -0.13
ERCC2P18074 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERCC2P18074 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
ERCC2P18074 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.22□□□□□ -0.13
ERCC2P18074 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms