Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 AC025183.3-201ENST00000623526 1482 ntBASIC12.35□□□□□ -0.43
APOC1P02654 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 TSPY25P-201ENST00000429463 745 ntBASIC12.35□□□□□ -0.43
APOC1P02654 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 AC005730.2-201ENST00000564549 1184 ntBASIC12.35□□□□□ -0.43
APOC1P02654 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.35□□□□□ -0.43
APOC1P02654 AL132994.2-201ENST00000603120 687 ntBASIC12.35□□□□□ -0.43
APOC1P02654 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.35□□□□□ -0.43
APOC1P02654 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 AL359845.1-201ENST00000458202 1648 ntBASIC12.35□□□□□ -0.43
APOC1P02654 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.35□□□□□ -0.43
APOC1P02654 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.35□□□□□ -0.43
APOC1P02654 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APOC1P02654 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 AL358933.1-201ENST00000565046 2830 ntBASIC12.34□□□□□ -0.43
APOC1P02654 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 MIR658-201ENST00000385210 100 ntBASIC12.34□□□□□ -0.43
APOC1P02654 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
APOC1P02654 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 RN7SL530P-201ENST00000485097 298 ntBASIC12.34□□□□□ -0.43
APOC1P02654 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 AC005740.2-201ENST00000511085 419 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms