Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 GUSBP10-201ENST00000417412 665 ntBASIC12.74□□□□□ -0.37
NKX2-2O95096 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.74□□□□□ -0.37
NKX2-2O95096 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.74□□□□□ -0.37
NKX2-2O95096 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 PI4KAP2-201ENST00000360806 2080 ntBASIC12.74□□□□□ -0.37
NKX2-2O95096 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.74□□□□□ -0.37
NKX2-2O95096 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 AL137784.3-201ENST00000623858 2288 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NKX2-2O95096 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 RN7SL769P-201ENST00000469386 295 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-2O95096 MIR3907-201ENST00000579424 151 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 AC132812.1-201ENST00000583145 892 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC103810.10-201ENST00000606504 343 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 AL009176.1-201ENST00000607876 650 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 AL021578.1-201ENST00000613646 709 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 AP001184.1-201ENST00000637936 376 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-2O95096 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 AC125807.2-201ENST00000513358 3514 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NKX2-2O95096 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.73□□□□□ -0.37
NKX2-2O95096 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-2O95096 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-2O95096 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-2O95096 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms