Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPO2Q9UMS6 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 POM121L4P-202ENST00000427789 1891 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 LINC00638-201ENST00000555578 2518 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 AC104581.4-201ENST00000623126 3052 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 RPL35P1-201ENST00000450819 370 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 HINT1-204ENST00000506908 681 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 FAM213AP2-201ENST00000521579 683 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 MIR5091-201ENST00000578707 93 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 MIR4746-201ENST00000579802 71 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 KF455155.1-201ENST00000604493 303 ntBASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPO2Q9UMS6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 ZSCAN5DP-201ENST00000600684 1488 ntBASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 LINC01230-201ENST00000625222 3017 ntBASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC135782.3-201ENST00000562782 2105 ntBASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AP001120.3-201ENST00000585729 489 ntBASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AC010531.8-201ENST00000623341 685 ntBASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNPO2Q9UMS6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms