Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AL162386.1-201ENST00000433817 645 ntBASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 PHBP5-201ENST00000449310 768 ntBASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 FAXDC2-205ENST00000517938 1203 ntTSL 2 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 ARL1-209ENST00000551671 879 ntTSL 2 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AL118557.1-201ENST00000554408 440 ntBASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 CMC2-223ENST00000570195 871 ntTSL 3 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AL157791.2-201ENST00000604758 478 ntBASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 DDX41-218ENST00000625286 150 ntTSL 5 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AL109618.1-201ENST00000434910 1683 ntBASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 SERF2-202ENST00000339624 506 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 RN7SL265P-201ENST00000486808 300 ntBASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AP000842.1-201ENST00000524467 698 ntBASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AC051619.1-201ENST00000560007 616 ntBASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 LINC00663-201ENST00000586645 1357 ntTSL 2 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIMBP3Q9UFD9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AC135506.1-201ENST00000603877 1799 ntBASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 CMTM2-201ENST00000268595 1054 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 KRTAP4-16-201ENST00000440582 708 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AL049597.1-201ENST00000447415 555 ntBASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AC008446.1-201ENST00000522454 451 ntBASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AP006287.1-201ENST00000533995 653 ntBASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 MT3-206ENST00000570176 579 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 KXD1-210ENST00000599000 498 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 TSPAN16-206ENST00000621731 642 ntTSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 AC138035.3-201ENST00000622706 2791 ntBASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIMBP3Q9UFD9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 Z93930.2-201ENST00000458080 505 ntTSL 3 BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AC139495.2-201ENST00000514492 1087 ntBASIC20.61■□□□□ 0.89
RIMBP3Q9UFD9 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms