Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AC005695.3-201ENST00000614522 232 ntBASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 HSPA8P9-201ENST00000485881 1943 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 XBP1P1-201ENST00000436573 652 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 POM121L10P-201ENST00000436994 1285 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AL096828.3-201ENST00000615354 462 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AC092299.1-201ENST00000632679 757 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 Z98885.3-201ENST00000624882 1757 ntBASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AMBRA1Q9C0C7 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AMBRA1Q9C0C7 AOC4P-203ENST00000566825 2289 ntBASIC13□□□□□ -0.33
AMBRA1Q9C0C7 AL031432.4-201ENST00000641729 2190 ntBASIC13□□□□□ -0.33
AMBRA1Q9C0C7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms