Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HPS1Q92902 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.93□□□□□ -0.34
HPS1Q92902 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 AC092139.4-201ENST00000624318 2794 ntBASIC12.92□□□□□ -0.34
HPS1Q92902 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC12.92□□□□□ -0.34
HPS1Q92902 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 AC023310.1-201ENST00000554836 735 ntBASIC12.92□□□□□ -0.34
HPS1Q92902 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 MIR6869-201ENST00000619434 62 ntBASIC12.92□□□□□ -0.34
HPS1Q92902 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HPS1Q92902 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
HPS1Q92902 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HPS1Q92902 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HPS1Q92902 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HPS1Q92902 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 AP003969.2-201ENST00000623739 2275 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
HPS1Q92902 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 MIR1908-201ENST00000410394 80 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC12.91□□□□□ -0.34
HPS1Q92902 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.91□□□□□ -0.34
HPS1Q92902 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HPS1Q92902 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 KRT90P-201ENST00000549264 1064 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.91□□□□□ -0.34
HPS1Q92902 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC12.91□□□□□ -0.34
HPS1Q92902 DUX4L45-201ENST00000566406 1057 ntBASIC12.91□□□□□ -0.34
HPS1Q92902 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms