Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CBX1P83916 AC007336.3-201ENST00000623886 2160 ntBASIC14.41□□□□□ -0.1
CBX1P83916 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 AL132656.4-201ENST00000623504 2122 ntBASIC14.41□□□□□ -0.1
CBX1P83916 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 AL353593.1-201ENST00000602517 3955 ntBASIC14.41□□□□□ -0.1
CBX1P83916 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 AL645937.2-201ENST00000396808 931 ntBASIC14.4□□□□□ -0.1
CBX1P83916 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 AL353779.1-201ENST00000434793 351 ntBASIC14.4□□□□□ -0.1
CBX1P83916 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 RNA5SP415-201ENST00000517246 115 ntBASIC14.4□□□□□ -0.1
CBX1P83916 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.4□□□□□ -0.1
CBX1P83916 AP002472.1-201ENST00000577490 586 ntBASIC14.4□□□□□ -0.1
CBX1P83916 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
CBX1P83916 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CBX1P83916 AC111182.1-201ENST00000588701 3419 ntBASIC14.4□□□□□ -0.1
CBX1P83916 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CBX1P83916 RHD-210ENST00000622561 3007 ntTSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CBX1P83916 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CBX1P83916 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CBX1P83916 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.39□□□□□ -0.11
CBX1P83916 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 UNC93B7-201ENST00000509439 705 ntBASIC14.39□□□□□ -0.11
CBX1P83916 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 AC112191.1-201ENST00000523689 701 ntBASIC14.39□□□□□ -0.11
CBX1P83916 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 AC012313.10-201ENST00000623509 926 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms