Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SSR1P43307 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SSR1P43307 MIR663B-201ENST00000408361 115 ntBASIC14.88□□□□□ -0.03
SSR1P43307 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 AC106794.1-201ENST00000506935 792 ntBASIC14.88□□□□□ -0.03
SSR1P43307 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.88□□□□□ -0.03
SSR1P43307 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.88□□□□□ -0.03
SSR1P43307 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 AC090164.2-201ENST00000611487 516 ntBASIC14.88□□□□□ -0.03
SSR1P43307 AL136295.7-201ENST00000619226 1200 ntBASIC14.88□□□□□ -0.03
SSR1P43307 AC004923.1-202ENST00000642106 209 ntBASIC14.88□□□□□ -0.03
SSR1P43307 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 AC020658.7-201ENST00000624274 2442 ntBASIC14.88□□□□□ -0.03
SSR1P43307 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.88□□□□□ -0.03
SSR1P43307 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SSR1P43307 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSR1P43307 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.87□□□□□ -0.03
SSR1P43307 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SSR1P43307 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SSR1P43307 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SSR1P43307 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 AL139158.3-201ENST00000641212 1562 ntBASIC14.87□□□□□ -0.03
SSR1P43307 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSR1P43307 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SSR1P43307 RN7SL277P-201ENST00000481521 288 ntBASIC14.87□□□□□ -0.03
SSR1P43307 HLA-J-204ENST00000495278 958 ntBASIC14.87□□□□□ -0.03
SSR1P43307 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.87□□□□□ -0.03
SSR1P43307 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.87□□□□□ -0.03
SSR1P43307 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.87□□□□□ -0.03
SSR1P43307 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 AC091271.1-201ENST00000611877 1162 ntBASIC14.87□□□□□ -0.03
SSR1P43307 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.87□□□□□ -0.03
SSR1P43307 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 AC135782.3-201ENST00000562782 2105 ntBASIC14.87□□□□□ -0.03
SSR1P43307 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SSR1P43307 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSR1P43307 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SSR1P43307 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSR1P43307 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms