Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AC138761.6-201ENST00000583997 1423 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 AC106827.1-201ENST00000366454 431 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 BRWD1P1-201ENST00000401091 371 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 BANF1P3-201ENST00000412556 261 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 AL008707.1-201ENST00000422498 534 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AC090857.1-201ENST00000527400 390 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SLC1A1P43005 MIR4326-201ENST00000582203 59 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AL451050.2-201ENST00000606967 682 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
SLC1A1P43005 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
SLC1A1P43005 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.5□□□□□ -0.09
SLC1A1P43005 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.5□□□□□ -0.09
SLC1A1P43005 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SLC1A1P43005 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SLC1A1P43005 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 AP003969.2-201ENST00000623739 2275 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AL031719.1-201ENST00000623365 2587 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC1A1P43005 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 MIR645-201ENST00000385283 94 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC1A1P43005 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.49□□□□□ -0.09
SLC1A1P43005 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AL022328.3-201ENST00000607943 679 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 MIR6769A-201ENST00000617340 73 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AL033527.4-201ENST00000641026 673 ntBASIC14.49□□□□□ -0.09
SLC1A1P43005 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SLC1A1P43005 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SLC1A1P43005 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC1A1P43005 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms