Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 LINC01783-202ENST00000614408 828 ntBASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 BX284668.2-205ENST00000619677 828 ntBASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 AC126755.1-201ENST00000525846 6405 ntBASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RSPO3Q9BXY4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RSPO3Q9BXY4 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.65□□□□□ -0.39
RSPO3Q9BXY4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RSPO3Q9BXY4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RSPO3Q9BXY4 AC015819.3-201ENST00000624305 2674 ntBASIC12.65□□□□□ -0.39
RSPO3Q9BXY4 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AL450468.2-201ENST00000565955 1889 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CFL1P6-201ENST00000400899 494 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AC026320.2-201ENST00000434379 478 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 STK24P1-201ENST00000455035 1291 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 RPL18AP8-201ENST00000486071 528 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 RN7SL665P-201ENST00000578793 300 ntBASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RSPO3Q9BXY4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 AC019109.1-201ENST00000401725 1874 ntBASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 AC027369.3-201ENST00000530465 3707 ntBASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RSPO3Q9BXY4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms