Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB40CQ96S21 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RAB40CQ96S21 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC106818.1-201ENST00000623223 3242 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 RN7SL752P-201ENST00000463779 287 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC015967.2-201ENST00000624092 234 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC006435.4-201ENST00000625037 234 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC025048.6-201ENST00000634326 1161 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 AL356737.1-201ENST00000634391 234 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 AL358472.5-202ENST00000641448 1267 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 AL139424.3-202ENST00000641619 917 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 LINC00115-201ENST00000473798 1317 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms