Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 DNM1P51-201ENST00000558149 522 ntBASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 AC005041.3-201ENST00000606287 649 ntBASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 AL358781.1-202ENST00000321081 1360 ntBASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 ZNF493-208ENST00000599461 1769 ntBASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHROOM3Q8TF72 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 OR2W2P-201ENST00000406313 909 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC010234.1-201ENST00000494599 870 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AP005264.5-201ENST00000590066 467 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC242376.2-201ENST00000619355 883 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 DGCR9-201ENST00000609630 2415 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 MKRN5P-201ENST00000445263 1467 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AL627231.1-201ENST00000394467 1125 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC007279.1-201ENST00000448547 837 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC091769.1-201ENST00000619576 568 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 AC009560.1-201ENST00000620208 434 ntBASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHROOM3Q8TF72 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 AC074138.1-201ENST00000611182 1303 ntBASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 AC115284.2-201ENST00000624646 2054 ntBASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ODCP-201ENST00000459650 1639 ntBASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 GGTLC4P-201ENST00000402176 664 ntBASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 MIR3180-2-201ENST00000581748 88 ntBASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHROOM3Q8TF72 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms